Network Analysis: Overview

Non peer reviewe

Robust vetoes for gravitational-wave burst triggers using known instrumental couplings

The search for signatures of transient, unmodelled gravitational-wave (GW) bursts in the data of ground-based interferometric detectors typically uses `excess-power' search methods. One of the most challenging problems in the burst-data-analysis is to distinguish between actual GW bursts and spurious noise transients that trigger the detection algorithms. In this paper, we present a unique and robust strategy to `veto' the instrumental glitches. This method makes use of the phenomenological understanding of the coupling of different detector sub-systems to the main detector output. The main idea behind this method is that the noise at the detector output (channel H) can be projected into two orthogonal directions in the Fourier space -- along, and orthogonal to, the direction in which the noise in an instrumental channel X would couple into H. If a noise transient in the detector output originates from channel X, it leaves the statistics of the noise-component of H orthogonal to X unchanged, which can be verified by a statistical hypothesis testing. This strategy is demonstrated by doing software injections in simulated Gaussian noise. We also formulate a less-rigorous, but computationally inexpensive alternative to the above method. Here, the parameters of the triggers in channel X are compared to the parameters of the triggers in channel H to see whether a trigger in channel H can be `explained' by a trigger in channel X and the measured transfer function.Comment: 14 Pages, 8 Figures, To appear in Class. Quantum Gra

Discovery of Novel Term Associations in a Document Collection

Non peer reviewe

Status of the GEO600 gravitational wave detector

The GEO600 laser interferometric gravitational wave detector is approaching the end of its commissioning phase which started in 1995.During a test run in January 2002 the detector was operated for 15 days in a power-recycled michelson configuration. The detector and environmental data which were acquired during this test run were used to test the data analysis code. This paper describes the subsystems of GEO600, the status of the detector by August 2002 and the plans towards the first science run

The statistical neuroanatomy of frontal networks in the macaque

We were interested in gaining insight into the functional properties of frontal networks based upon their anatomical inputs. We took a neuroinformatics approach, carrying out maximum likelihood hierarchical cluster analysis on 25 frontal cortical areas based upon their anatomical connections, with 68 input areas representing exterosensory, chemosensory, motor, limbic, and other frontal inputs. The analysis revealed a set of statistically robust clusters. We used these clusters to divide the frontal areas into 5 groups, including ventral-lateral, ventral-medial, dorsal-medial, dorsal-lateral, and caudal-orbital groups. Each of these groups was defined by a unique set of inputs. This organization provides insight into the differential roles of each group of areas and suggests a gradient by which orbital and ventral-medial areas may be responsible for decision-making processes based on emotion and primary reinforcers, and lateral frontal areas are more involved in integrating affective and rational information into a common framework

Yeast chassis design for production of dicarboxylic acids

Saccharomyces cerevisiae is a widely used microorganism for industrial biotechnology that has great potential to replace traditional petrochemical synthesis. Optimization of cell factories for production of different biotechnological products is still a cost and time inefficient process. Availability of pre-optimized yeast chassis cells, with improved precursor supply, will overcome such hurdles. Building upon this premise, we have developed a framework for rational design of chassis strains combining genome-scale metabolic models with a multi-objective metaheuristic approach. Here, we present the non-intuitive gene deletion targets optimized for growth-product coupled production of a family of C4-dicarboxylic acids, namely fumaric, succinic and malic acids. Several multi-gene deletion strains, including the chassis cell and the final producer strains, were implemented and experimentally tested. The strains encompassing the chassis backbone produce higher yields of respective targeted compounds than those containing merely the intuitive gene deletion(s). Taking advantage of the growth-product coupled design, best producing strains have been improved by adaptive laboratory evolution. As a proof-of-concept, we have generated pre-optimized chassis yeast cells for enhanced production of C4-dicarboxylic acids, hence showing that modular design strategies may contribute to accelerate cell factory development.info:eu-repo/semantics/publishedVersio

Identification and Classification of Hubs in Brain Networks

Brain regions in the mammalian cerebral cortex are linked by a complex network of fiber bundles. These inter-regional networks have previously been analyzed in terms of their node degree, structural motif, path length and clustering coefficient distributions. In this paper we focus on the identification and classification of hub regions, which are thought to play pivotal roles in the coordination of information flow. We identify hubs and characterize their network contributions by examining motif fingerprints and centrality indices for all regions within the cerebral cortices of both the cat and the macaque. Motif fingerprints capture the statistics of local connection patterns, while measures of centrality identify regions that lie on many of the shortest paths between parts of the network. Within both cat and macaque networks, we find that a combination of degree, motif participation, betweenness centrality and closeness centrality allows for reliable identification of hub regions, many of which have previously been functionally classified as polysensory or multimodal. We then classify hubs as either provincial (intra-cluster) hubs or connector (inter-cluster) hubs, and proceed to show that lesioning hubs of each type from the network produces opposite effects on the small-world index. Our study presents an approach to the identification and classification of putative hub regions in brain networks on the basis of multiple network attributes and charts potential links between the structural embedding of such regions and their functional roles

Setting upper limits on the strength of periodic gravitational waves from PSR J1939+2134 using the first science data from the GEO 600 and LIGO detectors

Data collected by the GEO 600 and LIGO interferometric gravitational wave detectors during their first observational science run were searched for continuous gravitational waves from the pulsar J1939+2134 at twice its rotation frequency. Two independent analysis methods were used and are demonstrated in this paper: a frequency domain method and a time domain method. Both achieve consistent null results, placing new upper limits on the strength of the pulsar's gravitational wave emission. A model emission mechanism is used to interpret the limits as a constraint on the pulsar's equatorial ellipticity

First upper limits from LIGO on gravitational wave bursts

We report on a search for gravitational wave bursts using data from the first science run of the LIGO detectors. Our search focuses on bursts with durations ranging from 4 ms to 100 ms, and with significant power in the LIGO sensitivity band of 150 to 3000 Hz. We bound the rate for such detected bursts at less than 1.6 events per day at 90% confidence level. This result is interpreted in terms of the detection efficiency for ad hoc waveforms (Gaussians and sine-Gaussians) as a function of their root-sum-square strain h_{rss}; typical sensitivities lie in the range h_{rss} ~ 10^{-19} - 10^{-17} strain/rtHz, depending on waveform. We discuss improvements in the search method that will be applied to future science data from LIGO and other gravitational wave detectors.Comment: 21 pages, 15 figures, accepted by Phys Rev D. Fixed a few small typos and updated a few reference